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Support #1238

Genotyping Data - plink format

Added by Dionysios Grigoriadis over 4 years ago. Updated over 4 years ago.

Status:
Resolved
Priority:
Normal
Assignee:
Dionysios Grigoriadis
Category:
Biomarkers and Genetics
Start date:
09/05/2019
% Done:

100%

Description

Hi,

We have granted access to the gwas data through EGA (through WTSI) after the process of signing an agreement (dataset EGAD00010000890). However, the data-set we granted access to contains illumina's IDATS files with the signal intensities making it time-consuming to process them. Is there anyway we can get this data in plink format?

Thanks a lot,
Dionysios Grigoriadis
Bioinformatician
St. George's University of London

#1

Updated by Stephanie Auty over 4 years ago

  • Status changed from New to In Progress
  • % Done changed from 0 to 10
  • Private changed from Yes to No

The Understanding Society team is looking into it and we will get back to you as soon as we can.

Best wishes,
Understanding Society User Support Team

#2

Updated by Stephanie Auty over 4 years ago

  • Status changed from In Progress to Feedback
  • Assignee changed from Stephanie Auty to Dionysios Grigoriadis
  • % Done changed from 10 to 90

Dear Dionysios,

We do not support these files here. Please write to the EGA about this.

Best wishes,
Stephanie

#3

Updated by Gundi Knies over 4 years ago

  • Status changed from Feedback to Resolved
  • % Done changed from 90 to 100

Also available in: Atom PDF